Monthly Archives: August 2021

Hot & Hungry

Hey everyone! My name is Cara Schiksnis and I’m going into my third year in the Marine Biology and Biological Oceanography PhD program at USC. I’m a member of the Hutchins lab where I study climate change effects on cyanobacteria, including studying the physiological and molecular response of cyanobacteria to the possible interactive effects of warming and nutrient limitation. These two stressors will become increasingly prevalent in the future ocean; in fact, warming of the ocean’s surface layer will lead to a reduced input of nutrients into the euphotic zone through a process called stratification. So, studying warming and nutrient limitation simultaneously is a more realistic way to try to understand how phytoplankton will react when both occur at the same time.

Happy girl on the trails

Happy girl on the trails

Why should we care about cyanobacteria, or any phytoplankton for that matter, you may ask? Believe it or not, marine phytoplankton (plankton that photosynthesize) contribute to 50% of carbon fixation on the planet (take that, trees), and thus not only hoist up the rest of the marine ecosystem/ food web but contribute immensely to biogeochemical cycling in the ocean. Thanks to these small but mighty creatures, the ocean regulates climate by absorbing carbon dioxide and sequestering it away from the atmosphere. Understanding how climate change will affect primary producers is essential for better predicting how these important, largescale climate processes may also vary. I could go on, but long story short all of these tiny microbes don’t get nearly enough of the credit and love that they deserve and it’s important that we continue to seek to understand how they may change as anthropogenic climate change continues to worsen.

As the upper layer of the ocean warms, stratification increases while circulation, including input of new nutrients, decreases

As the upper layer of the ocean warms, stratification increases while circulation, including input of new nutrients, decreases

With the Wrigley Fellowship, I was able to take my experiments out of my lab at USC, where I use unialgal (one species) cultures, to the lab at Wrigley, where the ocean access allowed me to collect natural seawater and its associated microbes in order to study these climate change effects on a community-wide level! Experimenting with natural communities can allow us to answer broader questions that relate to species interactions and food web dynamics. Plus, simulating climate change conditions on samples plucked straight from the ocean can oftentimes paint a more realistic picture of how these effects might actually play out. So, thanks to Juan, Dramamine, and my trusty bilge pump, I took my shaky sea legs for a spin and collected many liters of seawater, which I then took back to the lab and used to start to grow my experiments!

Bilge pumps are traditionally used to remove water from the boat, but here is me doing the exact opposite

Bilge pumps are traditionally used to remove water from the boat, but here is me doing the exact opposite

Through the haze of the Dramamine, I first hit the filter rig to collect “T0” samples so I would have a baseline to which I could compare my experimental treatments later on. Then, I aliquoted seawater into culture bottles, spiked them with nutrients, and set them to incubate in temperature- and light- controlled incubators. I created 2 nutrient treatments (silica (Si)-limited and Si-replete) and 3 temperature treatments (20C, 25C, and 30C), with 3 replicates of each, for a total of 18 bottles. My *hope* was that I would observe differences in growth and community structure between these treatments, and that perhaps there would be an interactive effect between warming and Si limitation. Recent work has shown that warming may cause some cyanobacteria to cope better with iron limitation, possibly due to increased metabolic efficiency, but whether this effect plays out with Si within coastal communities has yet to be explored.

After splitting into bottles and creating nutrient treatments, I let the replicates grow at 3 temperatures.

After splitting into bottles and creating nutrient treatments, I let the replicates grow at 3 temperatures.

I collected data such as cellular carbon, nitrogen, phosphorous and silica content, carbon fixation rates, photosynthetic pigment (Chl a) content, and DNA for assessing community structure. Results from an initial experiment I ran at the beginning of the summer interestingly show that the Si-limited communities grew the fastest at the warmest (30C) temperature, and even grew faster than the 30C, replete treatment. This indicates that warming might actually benefit nutrient limited communities; perhaps if the Si-limited community is dominated by smaller, non-siliceous cells such as cyanobacteria or smaller algae as opposed to larger diatoms, it is better equipped to thrive at higher temperatures. I am curious to continue analyzing these results and also to discover how the community structure changed as a result of these nutrient and temperature conditions.

The views on Catalina never get old

The views on Catalina never get old

As I wrap up my final days of experimentation out at Wrigley, I am able to reflect on and appreciate this unique and incredible research experience I’ve been lucky enough to receive this summer. A big thanks to all the Wrigley staff (especially with their help powering my experiment through the power outages), my support back at the Hutchins lab, and the oceans for making all of this possible- it’ll be a summer I won’t forget and I hope to be back on this dreamy island very soon!

Drones and Coastal Zones

By: Charnelle Wickliff

Hello everyone! My name is Charnelle and I am a masters student at Moss Landing Marine Laboratories. I am co-advised through CSUMB by Dr. Corey Garza and Dr. Alison Haupt. I am excited to able to come out this summer to hike, snorkel, enjoy the island life, and fly a drone from the beach. I have been keeping myself busy this past year by finishing my thesis proposal, reading research papers, and analyzing data.

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My research focuses drones and how they can be a great tool in monitor subtidal habitats, like rhodolith beds, on Catalina. My interest in drones (other than their cool factor) stems from my undergraduate experience at CSUMB building and operating remotely operated vehicles (ROVs) and a capstone project building an autonomous buoy that can station-keep for small boat deeper waters.

Many different methods exist in monitoring subtidal habitats from satellites to diving. Satellite images are great for looking at large scale habitats but can be costly when using satellites with finer resolution (<1m). Most free satellite data images can miss the finer details within a smaller habitat, because of the greater image resolution. Diving is great for looking at the smaller habitats in greater detail but is limited in bottom time (Ivošević et al. 2015). Diving in shallow water for an extended period will increase risk of decompression sickness and bends.

Technology now exist that may address the issue. Drones can cover large habitats in the less time than diving and can give a finer scope then satellite images (Ivošević et al, 2015). Equipped with high-resolution camera with polarized lenes, drones can capture the complexity and composition of a habitat with a few centimeters in resolution scale, filling the gap the limitations the other methods provide (Garza, 2019).

Image of Isthmus rhodolith bed January 2020. Taken from 70m  high. Orange arrows point to the Isthmus bed.

Image of Isthmus rhodolith bed January 2020. Taken from 70m
high. Orange arrows point to the Isthmus bed.

A great place to test drone ability to survey subtidal habitats is Santa Catalina Island. I became interested in rhodoliths, which are a free-forming calcifying red coralline algae, after being introduced to Dr. Diana Steller at MLML and her colleague Dr. Matt Edward at SDSU. I learned from them and literature that rhodolith beds are beaming with life from worms, juvenile urchins and snails, and so much more.

Image of the rhodolith bed at Emerald Bay January 2020. Taken at 70m high. Orange  circle is around the bed at Emerald Bay.

Image of the rhodolith bed at Emerald Bay January 2020. Taken at 70m high. Orange
circle is around the bed at Emerald Bay.

Catalina contains 7 beds within 6 different coves, and I will be comparing dive surveys and drone imagery for two beds of similar depth to detect and measure any differences in diving and drone measurements. I am measuring the perimeter (edge) and cover (total area and live rhodolith percent cover) of Emerald Bay and Isthmus Cove’s rhodolith beds. I was able to collect my first set of photos in January 2020 by flying a Phantom 4 drone using Pix4d software. I am using ArcGIS to process my images by measuring area and detecting perimeter, area, and scaring from mooring chains. I plan to collect my last set of photos at the end of the summer and run my final analysis. I hope your summer endeavors have gone well so far. Feel free to email me with any questions.

Best, Charnelle